Insertion junction: CLIP2.070755_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070755
Chromosome:chromosome 8
Location:2052057
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g368950 SHK2, DHQS,DQS1,DHQS,DHQS1 (1 of 1) 4.2.3.4 - 3-dehydroquinate synthase / Dehydroquinate synthase; 3-dehydroquinate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGTCTGGAGAGCTGTACGGCTGGGGGCAGCAGCCCGGCGTATCAGT
Internal bar code:TTGTTCAAGACTCGTAGAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACATCCGCACATCAATC
Suggested primer 2:GAAAGAACATGATCGGCGCC