Insertion junction: CLIP2.070763_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070763
Chromosome:chromosome 1
Location:4820850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033550 PDI2 (1 of 1) PTHR18929:SF87 - PROTEIN C03H12.1, ISOFORM A; Protein disulfide isomerase 2 outside_mRNA
Cre01.g800091 (1 of 1) K18663 - activating signal cointegrator complex subunit 3 [EC:3.6.4.12] (ASCC3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGTGGACCCCCAGGAACGAGGACCGACCCCCCAACTTTGGCGGCCTA
Internal bar code:GTTAGAGCCTTCAAAGCTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:65.7143
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTTTTGAGCTAGCGACA
Suggested primer 2:AAACAAAGTGCCAGACCCCA