Insertion junction: CLIP2.070768_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070768
Chromosome:chromosome 16
Location:1490454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652900 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAACAAGCTGCGCGCTCGTACGCCTCGTGCGCACGCTATGCTATCCT
Internal bar code:CTTTTGTTTGAAGAATCTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCACAGGCAAGGTGTAC
Suggested primer 2:GCTCCCGAAGTGACAAGTGA