Insertion junction: CLIP2.070770_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070770
Chromosome:chromosome 14
Location:913407
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g613350 (1 of 1) K14016 - ubiquitin fusion degradation protein 1 (UFD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTGCTACGTGGTGGCAAAGGGGTTGCAAAGGGGTGGTGTGGCGATGG
Internal bar code:TGTAATTTTGGGACAGAATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGATTGGAAGGAGACC
Suggested primer 2:TAGTATTACGGCAGCGGCAG