Insertion junction: CLIP2.070773_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070773
Chromosome:chromosome 1
Location:3355030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021700 CYG36 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCATTCTCCACACATCACGCACGAGCTGTCCCGGGTCTCTCCCTAGC
Internal bar code:ATGGTACCTTCACGCTCAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTGCAGTTTCACCACC
Suggested primer 2:GATAGCCCCGCAGATAACCC