Insertion junction: CLIP2.070780_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070780
Chromosome:chromosome 8
Location:2452961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372100 HSP70A Heat shock protein 70A; (1 of 1) K03283 - heat shock 70kDa protein 1/8 (HSPA1_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGTGCAGCCACAGCCTCAGTCGCGTTCGCTCCCACGGGCCGCTACG
Internal bar code:ATTAGTCATTGGTGTCAGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTCGAGCACCACCTCAA
Suggested primer 2:GATACGGTAGTCGGGTGCAG