Insertion junction: CLIP2.070781_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070781
Chromosome:chromosome 16
Location:1234598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650950 (1 of 1) PF01931 - Protein of unknown function DUF84 (NTPase_I-T) 5'UTR
Cre16.g651000 RFA3,RPA70B (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT; Replication protein A, 70 kDa DNA-binding subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATCATCTTGGCGCCAAAGTGCATCTCAGCGAATCTTGCTGTCAAGCGC
Internal bar code:AGTATGTCCGCCCTTTCCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1444
LEAP-Seq percent confirming:7.31707
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:76
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAACACCAGCTTGCTTTG
Suggested primer 2:TGTCGATTGCTGCTGAAGGT