Insertion junction: CLIP2.070786_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070786
Chromosome:chromosome 5
Location:2590142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239700 3'UTR
Cre05.g239750 ARS13 (1 of 2) IPR002591//IPR017849//IPR017850 - Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase // Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain; Arylsulfatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGAATGTGCGTAGATTGTTAGGAAAGCACAAAGAGAAAGGTTCGATAC
Internal bar code:TCCTTGTGCTAAGCTGTCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5034
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTGTGCTTGATACGACG
Suggested primer 2:ATCGATCTTCGCCATGTCCC