Insertion junction: CLIP2.070787_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070787
Chromosome:chromosome 2
Location:5358309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800235 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATACGGACTCACATGCACGGCCACGCGATGTTACCGCAGGGCTCAGG
Internal bar code:TCAATAGGAATGTCAAAGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTCAACACATTTGCACG
Suggested primer 2:TTCTGAGACTTCGGGCACAC