Insertion junction: CLIP2.070793_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070793
Chromosome:chromosome 17
Location:4099189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728900 FSA1,TAL3 (1 of 1) PTHR10683//PTHR10683:SF2 - TRANSALDOLASE // SUBFAMILY NOT NAMED; Transaldolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAGTAGCTGTAACTTGAACAATGGCACTGTACGGATTGGTTGCGCGAG
Internal bar code:GACACACTCTATTGTCTACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1460
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTAGATGGGGCTGTCCG
Suggested primer 2:AGACGCGTGCTCATCCATAG