Insertion junction: CLIP2.070800_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070800
Chromosome:chromosome 12
Location:2366677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAAAGTATGCCGTGGCTCCGACCGCCGCACTTGATTGACGCCATGTC
Internal bar code:ATGTGCAAGGTTTGGCATTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1945
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTGATCCATCCACCCGT
Suggested primer 2:ATGCTGACTTGCTGCTGTCT