Insertion junction: CLIP2.070801_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070801
Chromosome:chromosome 14
Location:3746819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631701 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGACATGTCCAGGTCATCGGCAAGACCGGCAACCCTGCTGCGGGTGC
Internal bar code:TATATTCGAGTCTTCGACTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1415
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGCATTTGTGCGTCTCG
Suggested primer 2:TTAGAGCACTGCACGGACTG