Insertion junction: CLIP2.070807_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070807
Chromosome:chromosome 1
Location:5361305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037850 BCC2,BXP2, BCCP2 Acetyl-CoA biotin carboxyl carrier; (1 of 1) IPR000089//IPR011053 - Biotin/lipoyl attachment // Single hybrid motif 3'UTR
lncRNA_TCONS_00014348 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGAATAACAAAATCGGCCCGAGCGCCAGTCAGCAGCACACCACCAG
Internal bar code:GGCATGCGCGGGATGTTGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATTGCCTCGAATGCAGC
Suggested primer 2:TCACAAGCGACCAGGAAGTC