Insertion junction: CLIP2.070807_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070807
Chromosome:chromosome 1
Location:5361306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g037850 BCC2,BXP2, BCCP2 Acetyl-CoA biotin carboxyl carrier; (1 of 1) IPR000089//IPR011053 - Biotin/lipoyl attachment // Single hybrid motif 3'UTR
lncRNA_TCONS_00014348 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAGCCGCTGGTGGCAGCGGGACCGCCCTGGGTACGTGTGTGCATATG
Internal bar code:GGCATGCGCGGGATGTTGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1794
LEAP-Seq percent confirming:60.7143
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAAGCGACCAGGAAGTC
Suggested primer 2:GCTATTGCCTCGAATGCAGC