Insertion junction: CLIP2.070809_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070809
Chromosome:chromosome 6
Location:8767876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310950 FAO7 (1 of 1) 1.5.8.3 - Sarcosine dehydrogenase; FAD-dependent oxidoreductase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACCAAAACAACCTAGCAAAACCAACAGGAGCCGCCTCGCGTCGCCGG
Internal bar code:GTTGGAATAAGCGGTCTCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1412
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCACGACAGCACATTTG
Suggested primer 2:AGGTTGCGAGTGGGAAGATG