Insertion junction: CLIP2.070814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070814
Chromosome:chromosome 11
Location:236422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467552 (1 of 3) K00850 - 6-phosphofructokinase 1 (pfkA, PFK) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCCGTTGATTAACTTCACGGCTTTGACGGCGTTGACCCACGGTTCGC
Internal bar code:TGTGGCAACTCAAACTAGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2010
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:CGGGCTGCAAATAATCGAGC