Insertion junction: CLIP2.070816_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070816
Chromosome:chromosome 9
Location:6674190
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g416700 Related to rhamnosyl methyltransferase; (1 of 10) PF13578 - Methyltransferase domain (Methyltransf_24) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGTGTACCACTGTGCGGCCAGCAATATGCGGCATAGGCACACGTCC
Internal bar code:CGCAGGCGCATGTAAAGGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTAGAGCTCGATGTCC
Suggested primer 2:TAAGCAATTGCCTCCCCTGG