Insertion junction: CLIP2.070819_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070819
Chromosome:chromosome 6
Location:5933774
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g289950 HEN2,HEL28 (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGCCTCGTCCAGCGCCGCGTCCAGCATCATCAAGCACAACCCGCGGT
Internal bar code:GTGGTAACTCGTTCTTTCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:123
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAACCCCAACGAAACCA
Suggested primer 2:CGCAAAACCACACTCCTGTG