Insertion junction: CLIP2.070822_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070822
Chromosome:chromosome 13
Location:1760413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574600 3'UTR
Cre13.g574650 (1 of 2) 3.6.1.62 - 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase / M(7)GpppN-mRNA hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAAACTAAAAAAGGAGGCGAAGCACGAAGAAGGGATCATCCCGCTCG
Internal bar code:TTGTTGAAACCGGGGCACGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1649
LEAP-Seq percent confirming:74.359
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGGACAGTAGCCGTCG
Suggested primer 2:CAAGCGCGTTGTGTCAAGAA