Insertion junction: CLIP2.070823_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070823
Chromosome:chromosome 10
Location:4163701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448977 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTTAAGGTACGGGACAGTATGAGTGGTTAGTTCCAGCAGTGCTAGC
Internal bar code:ATGGGCCGGAGGAACAGGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1847
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCGCTATGTTGTGCTC
Suggested primer 2:CTGACGCGGGATACTTCCTC