Insertion junction: CLIP2.070825_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070825
Chromosome:chromosome 2
Location:2366774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090900 MCP9 (1 of 15) IPR002067//IPR018108//IPR023395 - Mitochondrial carrier protein // Mitochondrial substrate/solute carrier // Mitochondrial carrier domain; Mitochondrial substrate carrier protein outside_mRNA
Cre02.g090950 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTATTAGATAAGCTCCAAGTTACAGCAACGGTAATCCATCATTCTTAT
Internal bar code:TCAGCCGTTAATGCCCTTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGCCTCGCAATCTGTTT
Suggested primer 2:TGGCCCCATTCATTGAAGCT