Insertion junction: CLIP2.070834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070834
Chromosome:chromosome 9
Location:4927167
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g403182 SPT6 (1 of 1) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACCTCCCCCTGTACCGATGTCCCCCACGTCTTAGATAGTCATGAAT
Internal bar code:GGGAAGAGTAATCTTAGATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGAGCAAGCAAGGGAAG
Suggested primer 2:TTTGGGGCAGGGAATGAGAC