Insertion junction: CLIP2.070843_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070843
Chromosome:chromosome 13
Location:959060
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g568176 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCAGCCAGCCATAGTTGTCAATCTCGGCCAGCCACACAAGCTGCATC
Internal bar code:CCGCATAAATGCCGGGAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACACTGCCTAGTCGCTCAC
Suggested primer 2:CATAGCATGCGTGTCAAGCC