Insertion junction: CLIP2.070844_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070844
Chromosome:chromosome 16
Location:4380981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668550 (1 of 1) PF01363//PF04366//PF13920 - FYVE zinc finger (FYVE) // Las17-binding protein actin regulator (Ysc84) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGAGATGATTGCGAAGTGCGACCTTCCAGGCTTTGTGTATTAAAACT
Internal bar code:AGCTGGAACGTGAGATTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2302
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTCGCTTGGCAGTTCCG
Suggested primer 2:TTGTATGCCGATACCTCCGC