Insertion junction: CLIP2.070848_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070848
Chromosome:chromosome 5
Location:48324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241751 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAATGCCGGCGGTCCCCATCACACATTTCCAGAGTGCCGGCAAAAACA
Internal bar code:GTAGACCATGTTTAGATGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3643
LEAP-Seq percent confirming:70.6667
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCTGCGCAACTGAACTG
Suggested primer 2:GAGGTGTCAACGCAGGTACA