Insertion junction: CLIP2.070853_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070853
Chromosome:chromosome 11
Location:2845721
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCAGCTGAGAGTCACAAGCTTTAGGACGCCGGAGTGGCGCAGCTTGG
Internal bar code:AGCGTAAGGCCTGTAGTCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACATGCAAACAGGGCG
Suggested primer 2:TTGACGGGTTGGACGATGAG