Insertion junction: CLIP2.070860_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070860
Chromosome:chromosome 17
Location:222789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697334 (1 of 10) PF13519 - von Willebrand factor type A domain (VWA_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCCAGAGGGGTTGTCATGAGCACCCGAGCCCAATGCATCAGGTTTG
Internal bar code:AACTGATTAGTTGCATTCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:902
LEAP-Seq percent confirming:69.3548
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCTCCGCTTTTCCTCCT
Suggested primer 2:TTCACGGGTACAGGGAAAGC