Insertion junction: CLIP2.070864_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070864
Chromosome:chromosome 6
Location:7282389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299100 3'UTR
Cre06.g299150 PHC9,PHC26 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 26 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACTATGCTGGCGGGCTGAAGGTGCCGGAGAGCAGTACAATGGCGGTA
Internal bar code:TAGTTTGTTTTGATGCTATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCCAAAATCCGCCGAA
Suggested primer 2:AGAAGGCGAAGAAGAAGGCC