Insertion junction: CLIP2.070866_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070866
Chromosome:chromosome 13
Location:5164993
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g607250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCGCCGCCTGCCTCAGGTCCGCCAGGCTCTGCAGCGCACCCAGTA
Internal bar code:GGCCAGGATTCTATTGTCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:4.34783
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCATCTCGCGCAGTAGG
Suggested primer 2:CCTCCAGCAATCGTTCCACT