Insertion junction: CLIP2.070872_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070872
Chromosome:chromosome 6
Location:8419170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308200 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTTGAGGCCTAACATGCTCCCTGTGATACCGTAACCTGAGCTAGAGTT
Internal bar code:GTAGCGCGCGACGAATGACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3456
LEAP-Seq percent confirming:98.7013
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAGGGCGTGTGTGTTA
Suggested primer 2:CTATCTGTACGGCAGCCTGG