Insertion junction: CLIP2.070873_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070873
Chromosome:chromosome 11
Location:2510580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095104 (1 of 1) K15193 - protein SPT2 (SPTY2D1, SPT2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGCTGGATTGATGCCGCTTCGGAATGGGGAGCATCAACGATTAAGC
Internal bar code:TAGTTATGTTTTCAGATTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1553
LEAP-Seq percent confirming:60.9756
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTAGTCCACCAGTGCTG
Suggested primer 2:AGAGGGGCTAGCTGCTTTTG