Insertion junction: CLIP2.070881_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070881
Chromosome:chromosome 7
Location:1099596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320400 ELI4,ELIP4 Early light-induced LHC-like protein; (1 of 5) PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTACTCCATGCCATCAAAAGAATTCTCCAGCAGACATAGGCCAGCTGG
Internal bar code:AGAATACGGTGTTACCTTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2132
LEAP-Seq percent confirming:52.7273
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTCTCTGAACGTGGAC
Suggested primer 2:TTTCTGGTAGTCCCAACGCC