Insertion junction: CLIP2.070883_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070883
Chromosome:chromosome 6
Location:5475779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286200 (1 of 4) PTHR22911//PTHR22911:SF6 - ACYL-MALONYL CONDENSING ENZYME-RELATED // SOLUTE CARRIER FAMILY 35 MEMBER G1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCCCGGGCCCCCACTTGAGGGGACGACCGACCCCCCCCCACACACAC
Internal bar code:AGCTATTAAGTCTTGCCGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2667
LEAP-Seq percent confirming:96.9231
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAACAAAGCGTGGGAGG
Suggested primer 2:GCGGTAGGATAGGCAGACAC