Insertion junction: CLIP2.070884_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070884
Chromosome:chromosome 3
Location:5501948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184750 (1 of 1) PF08524 - rRNA processing (rRNA_processing) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTTCTGCTGCCTCAAACCGTTTTGTCGAAAGAACCAGTTTTGATGGT
Internal bar code:CTGCGCCAGTAGCTTTCAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3792
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGCTATGCGGTAGTGAG
Suggested primer 2:CTCTTCCTCCTGCTCCTCCT