Insertion junction: CLIP2.070887_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070887
Chromosome:chromosome 6
Location:1384248
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g259550 (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCGGTGGCACAGCTCCCGCAGGTGGGCCCCCGTGAGGCCCTCCGTCG
Internal bar code:AACCTATTCAAGCGGGCGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAAACACAACCGATGC
Suggested primer 2:GTGCGGCATACGTTTCGTAC