Insertion junction: CLIP2.070888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070888
Chromosome:chromosome 12
Location:4099322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801401 (1 of 6) 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGTCTCGCTACGCACAGGCACTAGTCCACGAAGTTACCTATCAAAGC
Internal bar code:GTGTGTACTTCAAAGTAGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5294
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTTACCTGGTTGGGACG
Suggested primer 2:CACACGCCTCACTCACTCTT