Insertion junction: CLIP2.070889_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070889
Chromosome:chromosome 7
Location:5391285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350450 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B outside_mRNA
Cre07.g350451 (1 of 2) IPR001680//IPR017986//IPR020472//IPR027417 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCACCCTACCTCGCTTGTCACTCATGTTCACCGTCGCAGACATAGCGC
Internal bar code:TGCATAAATTAGGTTCCCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4599
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAAGCGGTAGTTGGTGT
Suggested primer 2:TAATCTGGTCGCTCGGATGC