Insertion junction: CLIP2.070898_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070898
Chromosome:contig 43
Location:8236
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre43.g802229 (1 of 3) 4.1.1.31 - Phosphoenolpyruvate carboxylase / Phosphoenolpyruvic carboxylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCAGCCCGGGGCCCGTCCAGATAATATCCAACCCTGCCAGCGAGTGC
Internal bar code:GGAATACGAATGCTCCGTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:21.6216
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATCCCTTCGTACGCACC
Suggested primer 2:GGTGTTTGGGATTGTGTGCC