Insertion junction: CLIP2.070905_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070905
Chromosome:chromosome 2
Location:7471106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392430 (1 of 1) 1.1.1.62 - 17-beta-estradiol 17-dehydrogenase / Estrogen 17-oxidoreductase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGCACATGCCTGGCGGGCCAAAACCCGCCCATTTCGACCTCAGGCGA
Internal bar code:ACGGTGGTATGGATGCTAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2264
LEAP-Seq percent confirming:86.0465
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACGAGGAGCGAATGAGG
Suggested primer 2:GCACCGTCCAAAGACCAAAC