Insertion junction: CLIP2.070906_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070906
Chromosome:chromosome 8
Location:1168137
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g363100 (1 of 2) PTHR23301//PTHR23301:SF0 - CHITIN BINDING PERITROPHIN-A // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTTTGCGGAGCTGATTTGGATGTTGAACCTGTGGGCCGCATGAGCAT
Internal bar code:TTAGGTTCCACATAGCCAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:0.775194
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:128
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCGTTCTCCATCCGT
Suggested primer 2:TTTTTGGTTCGCTGCATGGG