Insertion junction: CLIP2.070907_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070907
Chromosome:chromosome 7
Location:5573947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351900 (1 of 7) 2.7.10.2//2.7.12.1 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Dual-specificity kinase 5'UTR
Cre07.g351950 ZRT1,CrZIP1 (1 of 6) K14709 - solute carrier family 39 (zinc transporter), member 1/2/3 (SLC39A1_2_3, ZIP1_2_3); Zinc-nutrition responsive transporter outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTATTTCTCGACTTCCGCTGCTAAAACCCACCCGGCCCAGCTGTCAGC
Internal bar code:GGGAAGTATCAGTTATAATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1764
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGAAGCATGGATGGGGG
Suggested primer 2:GCTGGTATTGCGCAAGATGG