Insertion junction: CLIP2.070908_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070908
Chromosome:chromosome 2
Location:1845288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087200 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGCACAAGCAGCGGCGCACAAGCGGGCCTGGGTGCTGCACCGCCGC
Internal bar code:AATTAGTCTTGAGATGTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2996
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTCTATGGACTGGGCCT
Suggested primer 2:GAAGGCAGGACTGTTGTCGA