Insertion junction: CLIP2.070910_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070910
Chromosome:chromosome 16
Location:7660866
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g685389 CKIN3,CKINL,CKINL1 (1 of 1) PTHR24343//PTHR24343:SF200 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2-like protein 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGAGGAGGTTGGCGCTGACACGTACGCCCCACCCCGCACCGGCACGC
Internal bar code:GGAGTGGATCAGGGAGCATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:137
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTGAAGGTGATCTGG
Suggested primer 2:TTCAGTTCACACGTCTCCCG