Insertion junction: CLIP2.070911_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070911
Chromosome:chromosome 3
Location:6394104
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g192600 THK1 (1 of 1) 2.7.1.21 - Thymidine kinase; Thymidine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTTGGGCAGCAAGCTGTGGCGGGGCAGGGTGTGTGCGTGTGGAGGGG
Internal bar code:ACGCTTAGGCCGAACAATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3755
LEAP-Seq percent confirming:38.7097
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTCTGTTCCTCTCCCC
Suggested primer 2:TCACGGTCTACAAGGCACAC