Insertion junction: CLIP2.070913_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070913
Chromosome:chromosome 3
Location:3144063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164800 (1 of 1) PTHR24361:SF363 - PROTEIN KINASE-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCATGACATTTGACATTCACACGGCCATCGGCTGGGCGTTGGCCCCG
Internal bar code:TTCTATAAGTTGATGCTGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2876
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGAGATTGTGTGCCGGAA
Suggested primer 2:TCGCCCTTTCGCTCTTTCAT