Insertion junction: CLIP2.070914_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070914
Chromosome:chromosome 16
Location:4590573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671050 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 3'UTR
Cre16.g671100 (1 of 1) K12177 - COP9 signalosome complex subunit 3 (COPS3, CSN3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTCGCGCACTTCCGCCTTACCCTTGCTGCCGGCCTTCGGTGTTTGCA
Internal bar code:GGGGGGCACAGCGGGATTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:457
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATGCGGGTTGCTGATG
Suggested primer 2:GACTGGGTGACTGGGTGATG