Insertion junction: CLIP2.070915_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070915
Chromosome:chromosome 11
Location:2282709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801291 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGCGAACTTAAGCCGCATAGCATCCTCGAAACAACTGTCCAGGCCA
Internal bar code:CTAGGGGAGCAAGGAAAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3200
LEAP-Seq percent confirming:71.7391
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGGATGGTGGGCTCTA
Suggested primer 2:TTGAGGTTGCGTTGAAAGCG