Insertion junction: CLIP2.070921_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070921
Chromosome:chromosome 17
Location:96168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696600 FMR1 (1 of 1) PTHR11632:SF6 - PROTEIN F48E8.3; Fumarate reductase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGCCCAAACCTGAACCCGCCAAAACCTGAACCCGCCTAACCCTGTA
Internal bar code:TTTAGCGCGCAAGCGCGAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1745
LEAP-Seq percent confirming:96.4912
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGAGGGCTAGCGCTGAG
Suggested primer 2:CGCCTCTTCACCTTGGTCAT