Insertion junction: CLIP2.070932_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070932
Chromosome:chromosome 3
Location:2719893
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGACGGTAGCGCTCGGCATAGTCCACACCGGCGCTGCTGGCCCACCAC
Internal bar code:TTATGTAAGAGTACGATTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCGAAACCCTTTCTCCG
Suggested primer 2:GTTTCCTGACCACACAACGC