Insertion junction: CLIP2.070941_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070941
Chromosome:chromosome 3
Location:3030113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163600 3'UTR
Cre03.g163650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCTTGCTGTTCTCTCATGTTGCCACCCAGCAGCAACTCATGCGATAA
Internal bar code:ATTATATGTTTTTGATATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:952
LEAP-Seq percent confirming:61.7021
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTTCAGTGTGTGCGTGT
Suggested primer 2:ACAGGCTACCCACGCTACTA